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November 7, 2009 1:38 PM PST

My dad used to say technology is advancing so quickly that, by the time a product reaches market, it is already obsolete. Moreover, if you wait just a little longer, you can pay a lot less. The sequencing of the human genome takes the advancement of technology, and its fast reduction in cost, to an entirely new level.

Whole-genome sequencing could be affordable and accurate enough to perform on every newborn with a simple heel-prick blood test in a matter of years.

(Credit: Elizabeth Armstrong Moore/CNET)

The Human Genome Project, which officially completed the mind-boggling achievement of sequencing Jim Watson's genome in 2006, carried the equally mind-boggling price tag of $3 billion. If I may be so bold as to use that word thrice in one paragraph, even more mind-boggling is that a company called Complete Genomics has just sequenced three human genomes for $4,400 in materials, with an error rate of less than one base in 100,000.

DNA sequencing technology, which could help us detect genetic predispositions to illnesses, customize treatments accordingly, lead to the development of new energy sources, etc., is currently being used to either do long reads of hundreds of bases on genomes that have yet to be sequenced (see the news this week on the full sequencing of the domestic horse genome), or shorter reads that only align with a genome we have already sequenced (ours, for example).

In a paper published in the journal Science on Thursday, Complete Genomics shares the methods it used, which John Timmer at Ars Technica describes as "clever variants of well known molecular biology techniques to read massive amounts of DNA fragments that are, in total, about 65 bases long."

Moreover, Complete Genomics used more common--read more affordable--materials. For a detailed explanation of how this was done, check out the paper in Science, or Timmer's illustrated translation for Ars Technica.

Complete Genomics is not the lone warrior in this field. As CNET's Stephen Shankland reported in October, IBM Research has jumped into the game, and hopes to reduce the cost of genetic testing to as little as $100 per person. And then there's genomic technology manufacturer Illumina, and 454 Life Sciences. The list grows.

At this rate of advancement, it has been widely reported that the technology for whole-genome sequencing could be affordable and accurate enough to perform on every newborn with a simple heel-prick blood test in a matter of years. This makes a lot of people uneasy for several reasons, not the least of which is privacy.

"Bad things can be done with the genome," Dr. Jay Flatley of Illumina tells Times Online. "It could predict something about someone--and you could potentially hand information to their employer or their insurance company. People have to recognize that this horse is out of the barn, and that your genome probably can't be protected, because everywhere you go you leave your genome behind."

I have to wonder which is more unnerving to most people--that others will be able to access our genomic fingerprints, or that our bodies are able to be so accurately read at all. The secrets currently locked within us carry a certain mystique, and once unlocked could be put to uses that are possibly beyond our control. Whether this makes the human body more or less magical is debatable, but this much is not: The horse is out of the barn.

Originally posted at Health Tech
Elizabeth Armstrong Moore is a freelance journalist based in Portland, Ore. She has contributed to Wired magazine, The Christian Science Monitor, and public radio. Her semi-obscure hobbies include unicycling, slacklining, hula-hooping, scuba diving, billiards, Sudoku, Magic the Gathering, and classical piano. She is a member of the CNET Blog Network and is not an employee of CNET.
November 6, 2009 1:42 PM PST

Ongoing analysis of the trajectory of a piece of space junk that was believed to pose a possible threat to the International Space Station showed the debris would not pass close enough to the lab complex to force the crew to seek refuge in their Soyuz lifeboats, a NASA official said late Friday.

An agency spokesman said the station's six-member crew would be awakened early, at 10 p.m. EST as planned, but the astronauts would be told to go back to bed and not to press ahead with a tentative plan to shelter in place aboard the station's Soyuz ferry craft.

A graphic representation of debris in low-Earth orbit, defined as "the region of space within 2,000 km of the Earth's surface."

(Credit: NASA)

Earlier Friday, NASA flight controllers predicted the debris, of unknown origin, could pass within about six-tenths of a mile of the space station at 10:48 p.m., toward the end of the crew's normal sleep period. During the evening planning conference Friday afternoon, the astronauts were told to plan on getting up early so they could make their way to the Soyuz lifeboats by around 10:30 p.m. if necessary.

"The ballistics are saying they are looking at conjunction with space debris," Russian mission control radioed. "As you know, this is something we are prepared for. In the past, we have performed avoidance maneuvers, but this time maneuvering away from the path of the debris is not an option.

"Because we cannot perform avoidance maneuver, you will have to ingress Soyuz vehicles. Both Soyuz crews should be in their vehicles. This is what we have. We are going to work on the ballistics data to get greater precision, but right now we are in the red box. The probability of collision is non zero."

NASA flight controllers told the astronauts the tracking data was uncertain and that engineers did not yet have confidence in the trajectory projections. Pending additional analysis later in the afternoon, the crew was told to play it safe and plan on boarding the Soyuz lifeboats after shutting internal hatches in the U.S. segment of the lab complex.

After additional analysis, however, flight controllers concluded the unidentified debris would not pose a threat to the station, according to a NASA spokesman.

Last March, the station's three-man crew - Mike Fincke, Yury Lonchakov and Sandra Magnus - faced a similar situation and briefly took refuge in the lab's single Soyuz ferry craft when another piece of debris from an old rocket motor made a close approach.

There are more than 18,000 pieces of space junk in low-Earth orbit the size of a baseball and larger. U.S. Strategic Command prioritizes radar tracking to protect manned spacecraft first, followed by high-priority military and civilian payloads.

NASA monitors an imaginary volume around the space station roughly the shape of a pizza box measuring 0.466 miles thick and 15.5 miles square.

"Initially, we have a screening box, which is .75 kilometers radial miss, which would be up or down, by 25 kilometers in cross track, which would be left or right, by 25 kilometers down track, which is either in front or behind us," space station Flight Director Ron Spencer said in September.

"Space Command will alert us of any debris objects out there that are going to get that close to us. Then they increase tasking on those objects to try to get a better solution and decrease the uncertainty. Then we calculate a probability of collision based on the data Space Command gives us."

Spencer said NASA has two levels of concern.

"We have two thresholds, yellow and red," he wrote in an email exchange. "The yellow is 1-in-100,000 and the red is 1-in-10,000. We will not take any action if it is below the yellow threshold. If it between the yellow and red, we will only take action if it is easy to do so without impacting the mission. For a red threshold violation we will take action in most cases."

Updated at 6:45 p.m. EST: NASA officials say analysis shows the space debris in question poses no serious threat to the International Space Station.

Originally posted at The Space Shot
William Harwood has been covering the U.S. space program full-time since 1984, first as Cape Canaveral bureau chief for United Press International and now as a consultant for CBS News. He has covered more than 115 shuttle missions, every interplanetary flight since Voyager 2's flyby of Neptune, and scores of commercial and military launches. Based at the Kennedy Space Center in Florida, Harwood is a devoted amateur astronomer and co-author of "Comm Check: The Final Flight of Shuttle Columbia." You can follow his frequent status updates at the CBSNews.com Space Place, where this story was first published.
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November 5, 2009 10:56 AM PST

You've probably heard of or even owned a computer that automatically turns off its hard drive when it senses shock or heavy vibrations. That is an example of sensitive human-machine intimacy. Another example I like is tilting the iPhone to use it as the driving bar for my racing games. Well, that nifty human-to-computer interaction is about to go to whole new level.

HP announced Thursday a new inertial-sensing technology that enables the development of digital micro-electro-mechanical systems (MEMS) accelerometers that are up to 1,000 times more sensitive than those in high-volume products currently available.

A MEMS accelerometer is a sensor that can be used to measure vibration, shock, or change in velocity. When implemented, this allows the device to "feel" the environment it is in.

According to HP, the new sensing technology--the result of HP's 25 years of nano-sensing research--includes multiple detectors as part of a complete sensor network and therefore is capable of real-time data collection, management evaluation, and analysis. This information enables users to make better, faster decisions, and take subsequent action to improve safety, security, and sustainability.

... Read more
Originally posted at Crave
November 5, 2009 10:26 AM PST

(Credit: Video screenshot by Tim Hornyak/CNET)

Say salam wa aleikum to an Arabic-speaking android developed at United Arab Emirates University and billed as the first of its kind in the world. It could enter mass production to help people at shopping malls.

The Ibn Sina robot, named after an 11th century philosopher, can recognize faces, converse with people by speaking in classical Arabic, connect to the Internet, and retrieve information. As seen in the video below, it can also exchange kisses with people.

Software for Ibn Sina was developed by a team led by computer science assistant professor Nikolaos Mavridis, with the mechanics by Hanson Robotics. Mavridis says some companies have approached his lab and asked about using the turban-wearing, bearded bot in shopping malls or as a receptionist.

Doubtless Ibn Sina, known as Avicenna in English, would have been pleased.

Originally posted at Crave
Crave freelancer Tim Hornyak is the author of "Loving the Machine: The Art and Science of Japanese Robots." He has been writing about Japanese culture and technology for a decade. E-mail Tim.
November 2, 2009 12:10 PM PST
ISS (Credit: NASA)

The International Space Station isn't just an orbiting laboratory, spaceship testing ground, and multinational geek fest--it's also the world's highest (250 miles) and fastest (17,500 mph) computer network. We burrow under its metal skin and siphon out its most interesting specifications, like some kind of star-hopping alien data vampires (but without the plutonium-coated fangs).

Read more of "Space Station IT: High technology" at Crave UK.

Originally posted at Crave
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November 2, 2009 11:16 AM PST

Manning security checkpoints is hazardous duty, but vehicles still must be checked. So the U.S. Army is helping develop products that will allow soldiers to do their job, preferably from a distance.

Researchers and scientists at the U.S. Army Tank Automotive Research, Development and Engineering Center (aka TARDEC) have focused on semi-autonomous robotic systems capable of remotely inspecting a vehicle's undercarriage for explosives or roam the line looking for suspicious activity.

TARDEC will showcase a couple of its favorite autonomous robotic systems this week at the Michigan Security Network Market Leadership Conference. Both units were developed for military and homeland security applications, such as airport and seaport inspections and hazardous substance detection. But nothing says you can't deploy them at your next block party.

Here's a sneak peek.

The ODIS performs under-vehicle inspections to detect explosives, contraband, and radiological, chemical, and biological threats. It was developed in partnership with the DOD Joint Robotics Office, Utah State University, and Kuchera Defense Systems.

(Credit: Kuchera Defense Systems)

The SpectorRobotic System, developed by TARDEC in conjunction with Autonomous Solutions, is an omnidirectional platform designed to perform under-vehicle visual inspections for weapons, explosives, or other contraband, while keeping inspectors out of harm's way. It's currently being manufactured for use in Iraq and Afghanistan.

(Credit: Autonomous Solutions)

The ODIS system was used to screen vehicles for bombs and other threats by the U.S. Secret Service at President Barack Obama's inauguration last January.

(Credit: TARDEC photo by John Vala)

"Autonomous robotic systems like the Spector and ODIS offer military and civilian personnel a modular, mobile, low-cost, safe alternative to conventional inspection and patrol operations," said David J. Thomas, TARDEC Associate Director of Intelligent Ground Systems. "These devices can and do save lives while providing security representatives with the most advanced detection and inspection technologies available in the ground systems arena."

Originally posted at Military Tech
Mark Rutherford is a West Coast-based freelance writer. He is a member of the CNET Blog Network, and is not an employee of CNET. Email him at markr@milapp.com. Disclosure.
November 1, 2009 7:48 PM PST
(Credit: Novint)

Advanced gamer hardware may soon allow PacBot operators to tell exactly how hard a robot's grip is, allowing soldiers to more safely pick up and handle fragile or dangerous objects, while also increasing their situational awareness.

Novint Technologies, a company that makes 3D touch controllers for video and computer games, announced last month that it has been awarded a subcontract to co-develop a remote touch kit (RTK) for the iRobot unmanned ground vehicle (UGV) PacBot.

The new RTK will allow soldiers to tactually sense the amount of force a robot is exerting from a safe operating distance--a first for military UGVs, according to Novint. It will also increase spatial sensitivity.

For example, the soldier would feel the bumps and jerks when driving the robot, thus improving performance over rugged terrain. The operator would also "feel" when the robot's arm touches a wire--a not inconsequential feature when dealing with booby-trapped IEDs. The result, the company says, will be "greatly reduced task times and operator burden, increased dexterity and situational awareness, and reduced training."

"As demand for unmanned military robots continues to grow, Novint's touch technology will play a crucial role in enhancing operator control during mission-tasks such as bomb disposal or surveillance," Novint Technologies CEO Tom Anderson said in a statement.

Novint already offers interactive, bi-directional, high-fidelity 3-D that enables doctors and technicians to interact with medical imagery such as MRIs, CT scans and 3D ultrasounds.

It does this through applied Haptics, the art and science of applying sense of touch to human interaction with computer generated environments. A Haptic device makes touching a virtual object seems real and tangible.

The project is funded by the Secretary of Defense Joint Ground Robotics Enterprise through the Robotics Technology Consortium.

Originally posted at Military Tech
Mark Rutherford is a West Coast-based freelance writer. He is a member of the CNET Blog Network, and is not an employee of CNET. Email him at markr@milapp.com. Disclosure.
October 30, 2009 1:37 PM PDT

KENNEDY SPACE CENTER, Fla.--A preliminary look at data from NASA's Ares I-X test flight Wednesday shows the towering rocket performed as well or better than computer modeling predicted during the climb out of the dense lower atmosphere, a senior NASA manager said Friday.

One of three huge parachutes failed to inflate during the spent booster's descent to the Atlantic Ocean and a second chute only inflated halfway, resulting in a hard splash down that caused the rocket's case to buckle.

NASA's Ares I-X rocket blasts off from pad 39B at the Kennedy Space Center. Engineers say data from the test flight shows the booster met or exceeded predictions from computer modeling.

(Credit: NASA)

But Mission Manager Bob Ess said the parachute system, flying for the first time, was designed for NASA's planned Ares 1 rocket, which is 15 percent lighter than the test version, and that engineers will have plenty of time to correct whatever went wrong.

"No one is concerned about it," Ess said. "In fact, the parachute guys were ecstatic, was their words, (about) the information they got from this flight. They really wanted to test this out."

The Ares I-X rocket was designed to match the characteristics of NASA's planned shuttle replacement, the more powerful Ares I. The test version featured a four-segment shuttle booster, a dummy fifth segment housing guidance and control equipment and an unpowered mockup of the rocket's upper stage and crew capsule.

The 327-foot-tall test rocket was launched Wednesday from shuttle complex 39B at the Kennedy Space Center. The major goals of the unmanned six-minute flight were to collect engineering data on how the tall, slender rocket flew through the lower atmosphere, how the structure responded to aerodynamic and acoustic forces and how the new parachute system, scaled for the planned Ares I, performed.

During the initial seconds of flight, the rocket's nozzle moved 1 degree as planned to help the booster "walk off" the pad, preventing its hot exhaust plume from hitting the upper sections of the shuttle service gantry. As expected, the plume caused minor damage to the lower sections of the gantry, but Ess said that would not be a problem for the new service tower that will be used for Ares rockets.

... Read more
Originally posted at The Space Shot
William Harwood has been covering the U.S. space program full-time since 1984, first as Cape Canaveral bureau chief for United Press International and now as a consultant for CBS News. He has covered more than 115 shuttle missions, every interplanetary flight since Voyager 2's flyby of Neptune, and scores of commercial and military launches. Based at the Kennedy Space Center in Florida, Harwood is a devoted amateur astronomer and co-author of "Comm Check: The Final Flight of Shuttle Columbia." You can follow his frequent status updates at the CBSNews.com Space Place, where this story was first published.
October 30, 2009 11:55 AM PDT
Creeper2

Creeper2 has an all-aluminum custom chassis and uses dual processors to ensure smooth movements.

(Credit: Trossen Robotics)

If I wasn't so worried about traumatizing the kids in my neighborhood, dispensing trick or treat candy in this creepy spider bot pumpkin would be awesome.

It runs C on an Axon microcontroller. It uses all digital servos and can lift over twice its body weight. The software (soon to be given out open source) allows for six synchronous degrees of motion. Future additions will include foot sensors and a remote control option.

Based on that info, and other nuggets gleaned from the Trossen Robotics forums, you might be able to have a Creeper2 bot of your own ready for next year.

Or, better yet, put a Santa head on top of that thing and march it out in the living room on Christmas morning. Your kids are sure to have suppressed memories of it that will bubble up to the surface years and years from now causing a dramatic and crippling meltdown. Priceless.

This story originally appeared on Gizmodo.

Originally posted at Crave
October 29, 2009 10:05 AM PDT

AIDA in Audi

MIT's concept robot head mounts on the dashboard to assist with navigation.

(Credit: MIT)

MIT intends to revolutionize GPS navigation by making it friendly and predictive, using a friendly robot helper to anticipate your needs. The Affective Intelligent Driving Agent (AIDA) is a robot head on an articulated neck, reminiscent of movie robots from the 1980s, that mounts in the center of the dashboard.

It incorporates an expressive "face" that can smile, look sad, show warning signs, and even wink at you. AIDA was developed as a collaboration between the Personal Robots Group at the MIT Media Lab, MIT's SENSEable City Lab, and Volkswagen Group of America's Electronics Research Lab.

AIDA's expressive behaviors are designed to endear the device to you as it helps in your daily navigation. The robot learns your daily commute and which areas you frequent for which purposes.

For example, if you always head to a particular district in your city around dinner time, it will assume you like to eat dinner there. After it memorizes your commute, it will automatically plug in your route to work when you get into the car on a weekday morning. If you go to a hotel for a dalliance every Thursday at noon, it will probably give you a wink and a knowing grin as it maps the route for you.

... Read more
Originally posted at The Car Tech blog
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